galamm - Generalized Additive Latent and Mixed Models

Estimates generalized additive latent and mixed models using maximum marginal likelihood, as defined in Sorensen et al. (2023) <doi:10.1007/s11336-023-09910-z>, which is an extension of Rabe-Hesketh and Skrondal (2004)'s unifying framework for multilevel latent variable modeling <doi:10.1007/BF02295939>. Efficient computation is done using sparse matrix methods, Laplace approximation, and automatic differentiation. The framework includes generalized multilevel models with heteroscedastic residuals, mixed response types, factor loadings, smoothing splines, crossed random effects, and combinations thereof. Syntax for model formulation is close to 'lme4' (Bates et al. (2015) <doi:10.18637/jss.v067.i01>) and 'PLmixed' (Rockwood and Jeon (2019) <doi:10.1080/00273171.2018.1516541>).

Last updated 2 months ago

generalized-additive-modelshierarchical-modelsitem-response-theorylatent-variable-modelsstructural-equation-models

7.32 score 28 stars 41 scripts 226 downloads

nettskjemar - Connect to the 'nettskjema.no' API of the University of Oslo

Enables users to retrieve data, meta-data, and codebooks from <https://nettskjema.no/>. The data from the API is richer than from the online data portal. Mowinckel (2021) <doi:10.5281/zenodo.4745481>.

Last updated 3 years ago

4.75 score 2 stars 14 scripts 135 downloads

questionnaires - Package with functions to calculate components and sums for LCBC questionnaires

Creates summaries and factorials of answers to questionnaires.

Last updated 1 years ago

4.63 score 3 stars 13 scripts

tsdrtools - Convenience package for installing R-packages on UiO TSD

Some packages are hard to install on the secure closed server of the University of Oslo, TSD This package has some functions to help users more easily install packages to TSD that cannot be installed using the mini-CRAN service within TSD.

Last updated 2 years ago

4.18 score 6 stars 5 scripts

tsdrtools - Convenience package for installing R-packages on UiO TSD

Some packages are hard to install on the secure closed server of the University of Oslo, TSD This package has some functions to help users more easily install packages to TSD that cannot be installed using the mini-CRAN service within TSD.

Last updated 2 years ago

4.18 score 6 stars 5 scripts

nettskjemar - Connect to the 'nettskjema.no' API of the University of Oslo

Enables users to retrieve data, meta-data, and codebooks from <https://nettskjema.no/>. The data from the API is richer than from the online data portal. Mowinckel (2021) <doi:10.5281/zenodo.4745481>.

Last updated 3 years ago

3.75 score 2 stars 14 scripts 133 downloads

Conversions - Collection of functions that convert certain RAW data in the LCBC database

Collection of functions that convert certain RAW data in the LCBC database.

Last updated 4 years ago

3.65 score 10 scripts

ggsegSchaefer - Schaefer datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Schaefer atlases to plot using functions from those two packages.

Last updated 3 years ago

3.42 score 11 stars 48 scripts

ggsegGlasser - Glasser datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Glasser atlases to plot using functions from those two packages.

Last updated 3 years ago

3.31 score 5 stars 81 scripts

lcbcr - LCBC brand package

Functions and setups with brand styling and lab general setups.

Last updated 3 years ago

3.00 score 2 scripts

noasr - NOAS convenience functions

Functions created to work well with LCBC's Nephew of All Spreadsheet data.

Last updated 4 years ago

3.00 score 4 scripts

ggsegYeo2011 - Yeo 2011 Datasets for the 'ggseg'-Package

This is a support package for the ggseg, and ggseg3d packages. It contains the Yeo 2011 atlases to plot using functions from those two packages.

Last updated 2 years ago

2.83 score 9 stars 15 scripts

BayesianLaterality - Predict Brain Asymmetry Based on Handedness and Dichotic Listening

Functional differences between the cerebral hemispheres are a fundamental characteristic of the human brain. Researchers interested in studying these differences often infer underlying hemispheric dominance for a certain function (e.g., language) from laterality indices calculated from observed performance or brain activation measures . However, any inference from observed measures to latent (unobserved) classes has to consider the prior probability of class membership in the population. The provided functions implement a Bayesian model for predicting hemispheric dominance from observed laterality indices (Sorensen and Westerhausen, Laterality: Asymmetries of Body, Brain and Cognition, 2020, <doi:10.1080/1357650X.2020.1769124>).

Last updated 1 years ago

2.70 score 3 scripts 314 downloads

nettskjema.tsd - Decrypt and Organise Nettskjema Data Within TSD

Working with Nettskjema (<https://nettskjema.no/>) data inside TSD can be challenging. This package aims to aid users in managing their incoming Nettskjema data by decrypting the data and storing the nettskjema data and meta-data in convenient and standardised ways. This package functionality currently only works on the Linux VMs of TSD, and for version 1 of the nettskjema data delivery to TSD.

Last updated 2 years ago

2.70 score 3 scripts

ggsegJHU - JHU datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the JHU atlases to plot using functions from those two packages.

Last updated 3 years ago

2.40 score 5 stars 4 scripts

ggsegTracula - Tracula datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Tracula atlases to plot using functions from those two packages.

Last updated 11 months ago

2.30 score 4 stars 4 scripts

ggsegDesterieux - Desterieux datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Desterieux atlases to plot using functions from those two packages.

Last updated 3 years ago

2.26 score 2 stars 18 scripts

ggsegChen - Chen datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Chen atlases to plot using functions from those two packages.

Last updated 3 years ago

2.00 score 2 stars 2 scripts

ggsegHO - Harvard-Oxford datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the Harvard-Oxford cortical atlases to plot using functions from those two packages.

Last updated 3 years ago

2.00 score 2 stars 5 scripts

ggsegDefaultExtra - Extra dk and aseg datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the extra dk and aseg, with some minor differences from the original atlases to plot using functions from those two packages.

Last updated 3 years ago

2.00 score 2 stars 4 scripts

ggsegICBM - ICBM datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the ICBM atlases to plot using functions from those two packages.

Last updated 2 years ago

1.70 score 1 stars 7 scripts

psykinematix - Utilities to work with data from Psykinematix Visual Psychophysics

Psykinematix Visual Psychophysics is a tool to develop and deploy psychophysical experiments. This packages enables the user to read in data from this tool into R for further processing.

Last updated 3 years ago

1.70 score 3 scripts

ggsegDKT - Desikan-Killiany-Tourville datasets for the ggseg-plotting tool

This is a support package for the ggseg, and ggseg3d packages. It contains the DKT atlases to plot using functions from those two packages.

Last updated 3 years ago

1.70 score 1 stars 10 scripts

eprimeParser - LCBC E-prime data processing pipeline

This package contains functions to process the eprime data for LCBC. The functions are adaptations of scripts James Michael Roe made, that Athanasia Monika Mowinckel converted.

Last updated 5 years ago

1.70 score 1 scripts